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  5. Mp1g03300.1

Mp1g03300.1


Description : cation exchanger (NCL/EF-CAX)


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g03300.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G29025 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
AT2G34020 No alias Calcium-binding EF-hand family protein 0.02 OrthoFinder output from all 47 species
Adi_g047643 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06718 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011783 No alias cation exchanger *(NCL/EF-CAX) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000480.66 No alias Solute transport.carrier-mediated transport.CDF... 0.02 OrthoFinder output from all 47 species
Dde_g24868 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g11414.1 LOC_Os01g11414 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
LOC_Os02g14980.1 LOC_Os02g14980 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Lfl_g03289 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
MA_104140g0010 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
MA_104140g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g41366 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44003 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49587 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01132 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 329 395
IPR004837 NaCa_Exmemb 100 268
IPR004837 NaCa_Exmemb 472 614
No external refs found!