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  5. Mp1g02820.1

Mp1g02820.1 (CHA18, CHR18)


Aliases : CHA18, CHR18

Description : chromatin remodeling factor (SMARCAL1)


Gene families : OG0002390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g02820.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g40730.1 LOC_Os07g40730 chromatin remodeling factor (SMARCAL1) 0.04 OrthoFinder output from all 47 species
Msp_g47324 CHA18, CHR18 chromatin remodeling factor *(SMARCAL1) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g41946 CHA18, CHR18 chromatin remodeling factor *(SMARCAL1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 638 746
IPR000330 SNF2_N 354 588
No external refs found!