Zm00001e042448_P001 (LBD29, ASL16, Zm00001e042448)


Aliases : LBD29, ASL16, Zm00001e042448

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042448_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00241970 LBD27, SCP,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
AMTR_s00007p00227160 LBD15, ASL11,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AMTR_s00041p00044170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AMTR_s00076p00127530 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00080p00153120 LBD1,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00184p00044240 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
AT1G06280 LBD2 LOB domain-containing protein 2 0.03 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.04 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.05 OrthoFinder output from all 47 species
AT2G30340 LBD13 LOB domain-containing protein 13 0.04 OrthoFinder output from all 47 species
AT2G31310 LBD14 LOB domain-containing protein 14 0.04 OrthoFinder output from all 47 species
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.03 OrthoFinder output from all 47 species
AT2G42430 LBD16, ASL18 lateral organ boundaries-domain 16 0.02 OrthoFinder output from all 47 species
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT2G45420 LBD18 LOB domain-containing protein 18 0.04 OrthoFinder output from all 47 species
AT3G03760 LBD20 LOB domain-containing protein 20 0.03 OrthoFinder output from all 47 species
AT3G11090 LBD21 LOB domain-containing protein 21 0.02 OrthoFinder output from all 47 species
AT3G27650 LBD25 LOB domain-containing protein 25 0.02 OrthoFinder output from all 47 species
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
Aev_g38835 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08616 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15807 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27434 LBD25 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g29995 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33932 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00489 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07544 LBD19 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13722 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23864 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56957 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64401 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67490 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68836 LBD20 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70670 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12703.t1 LOB, Aspi01Gene12703 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12790.t1 LBD4, Aspi01Gene12790 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18506.t1 LBD29, ASL16,... AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25201.t1 LBD25, Aspi01Gene25201 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25203.t1 LBD25, Aspi01Gene25203 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41937.t1 AS2, Aspi01Gene41937 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43012.t1 AS2, Aspi01Gene43012 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43917.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52657.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65362.t1 AS2, Aspi01Gene65362 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66498.t1 LBD4, Aspi01Gene66498 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0072.g037067 LBD4 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g44432 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G090000.1 LBD20, Ceric.14G090000 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G046700.1 LBD4, Ceric.15G046700 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G046200.1 AS2, Ceric.34G046200 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g06562 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06666 LOB AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g34747 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39794 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09508 AS2 AS2/LOB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g32484 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46319 LBD20 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12391 LBD25 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26972 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003547001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01004323001 ASL1, LBD36 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01006269001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01007677001 LOB RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016330001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016332001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01016335001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01029979001 LBD20 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01032592001 LBD27, SCP RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01032714001 LBD15, ASL11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 OrthoFinder output from all 47 species
Gb_02663 LBD18 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Gb_08465 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_16914 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_19384 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_19390 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_22180 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_23688 LBD15, ASL11 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g60960.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g57490.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g05500.1 LBD29, ASL16,... transcription factor (AS2/LOB) 0.07 OrthoFinder output from all 47 species
LOC_Os05g07270.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
LOC_Os05g27980.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
LOC_Os10g07510.1 LBD18, LOC_Os10g07510 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Len_g55694 LBD20 AS2/LOB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430986g0010 LBD15, ASL11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_10430986g0020 LBD15, ASL11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_19148g0010 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_290245g0010 AS2 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_292200g0010 LBD11 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
MA_9412105g0010 LBD15, ASL11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_97411g0010 LBD29, ASL16 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Msp_g03461 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44204 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44922 LBD20 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28878 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g31146 LBD12, ASL5, PCK1 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43400 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43401 No alias AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21567 LOB AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30887 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43000 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56591 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21903 LBD22 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22342 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24707 LBD22 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25313 AS2 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c4_9600V3.1 LBD20, Pp3c4_9600 LOB domain-containing protein 20 0.01 OrthoFinder output from all 47 species
Ppi_g09676 LBD20 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16452 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27127 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31655 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33439 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020470 LOB AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc02g069440.3.1 LBD4, Solyc02g069440 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc03g095940.1.1 LBD21, Solyc03g095940 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc05g048740.3.1 LBD11, Solyc05g048740 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc06g007390.4.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc06g050430.3.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc06g071660.3.1 LOB, Solyc06g071660 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Solyc06g082310.3.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Solyc06g082430.2.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Solyc11g072470.3.1 LBD1, Solyc11g072470 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc12g010810.1.1 LBD2, Solyc12g010810 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Spa_g16209 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40680 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12549 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41712 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001031_P001 LBD18, Zm00001e001031 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Zm00001e019686_P001 LBD20, Zm00001e019686 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e031510_P001 LBD12, ASL5,... transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Zm00001e038429_P001 LBD11, Zm00001e038429 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e038582_P001 LBD18, Zm00001e038582 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 7 105
No external refs found!