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Aliases : LBD29, ASL16, Zm00001e042348
Description : transcription factor (AS2/LOB)
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00187850 | LBD2,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G40470 | LBD15, ASL11 | LOB domain-containing protein 15 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116107 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g10153 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28141 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70670 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24489 | LOB | AS2/LOB-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g36506 | LOB | AS2/LOB-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.12G084800.1 | LBD25, Ceric.12G084800 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25624 | LBD25 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016329001 | LBD1 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024662001 | LBD12, ASL5, PCK1 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025128001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_21467 | LBD22 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g57490.1 | LBD16, ASL18,... | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g14270.1 | LBD18, LOC_Os03g14270 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g16017 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20443 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_113501g0010 | LBD12, ASL5, PCK1 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| MA_290245g0010 | AS2 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42314 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g25313 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g19686 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g091420.2.1 | LBD18, Solyc01g091420 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g067800.4.1 | LBD25, Solyc02g067800 | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g069440.3.1 | LBD4, Solyc02g069440 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g007390.4.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g045530.3.1 | LBD4, Solyc11g045530 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06126 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g40680 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001031_P001 | LBD18, Zm00001e001031 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016785_P005 | LOB, Zm00001e016785 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026736_P001 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031510_P001 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038582_P001 | LBD18, Zm00001e038582 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 14 | 111 |
| No external refs found! |