LOC_Os04g27760


Description : 16.1.5 secondary metabolism.isoprenoids.terpenoids Terpenoid cyclases/Protein prenyltransferases superfamily protein


Gene families : OG_01_0000052 (Gene family) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g27760
Cluster HCCA cluster: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AT3G29190 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
AT3G32030 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
AT4G15870 ATTS1, TS1 terpene synthase 1 0.02 Gene family
LOC_Os03g24690 Os03g0361700,... 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.06 Gene family
LOC_Os04g27070 Os04g0339500 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os05g16980 No alias No description available 0.05 Gene family
LOC_Os05g24500 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
Solyc04g051620.2.1 Solyc04g051620.2 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc04g054380.1.1 Solyc04g054380.1 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc07g008690.3.1 Solyc07g008690.3 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
Solyc09g092470.2.1 Solyc09g092470.2 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
Solyc12g006570.2.1 Solyc12g006570.2 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
Zm00001d024210 GRMZM2G127087 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan
MF GO:0010333 terpene synthase activity IEA InterProScan
MF GO:0016829 lyase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 1 138
IPR005630 Terpene_synthase_metal-bd 93 211
No external refs found!