LOC_Os04g27720 (Os04g0344400)


Aliases : Os04g0344400

Description : 16.1.5 secondary metabolism.isoprenoids.terpenoids Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21 (TPS21)


Gene families : OG_01_0000052 (Gene family) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g27720
Cluster HCCA cluster: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G48800 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Gene family
AT1G70080 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Gene family
GSVIVT01014175001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
GSVIVT01036367001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036373001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os08g07080 Os08g0167800 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc12g006570.2.1 Solyc12g006570.2 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
Zm00001d024210 GRMZM2G127087 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Zm00001d032230 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan
MF GO:0010333 terpene synthase activity IEA InterProScan
MF GO:0016829 lyase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 18 178
IPR005630 Terpene_synthase_metal-bd 278 448
No external refs found!