LOC_Os04g27670 (Os04g0344100)


Aliases : Os04g0344100

Description : 16.1.5 secondary metabolism.isoprenoids.terpenoids Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21 (TPS21)


Gene families : OG_01_0000052 (Gene family) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g27670
Cluster HCCA cluster: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G70080 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
AT3G14540 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
AT3G29110 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
AT3G29410 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Gene family
AT3G32030 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
AT4G13300 TPS13, ATTPS13 terpenoid synthase 13 0.02 Gene family
AT4G20230 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
AT5G48110 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Gene family
GSVIVT01036313001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036322001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.05 Gene family
GSVIVT01036373001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
GSVIVT01036374001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os01g23530 Os01g0337100 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
LOC_Os03g22634 Os03g0348200 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
LOC_Os03g31430 Os03g0428200 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
LOC_Os04g27400 Os04g0341800 16.1.5 secondary metabolism.isoprenoids.terpenoids In... 0.02 Gene family
LOC_Os05g24500 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os08g04500 Os08g0139700 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
MA_10433916g0010 No alias No description available 0.03 Gene family
Solyc06g059930.3.1 Solyc06g059930.3 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc06g060013.1.1 Solyc06g060013.1 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
Zm00001d024207 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
Zm00001d024210 GRMZM2G127087 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.07 Gene family
Zm00001d024478 GRMZM2G117319 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan
MF GO:0010333 terpene synthase activity IEA InterProScan
MF GO:0016829 lyase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 50 314
No external refs found!