LOC_Os04g27540 (Os04g0342800)


Aliases : Os04g0342800

Description : 16.1.5 secondary metabolism.isoprenoids.terpenoids Terpenoid cyclases/Protein prenyltransferases superfamily protein


Gene families : OG_01_0000052 (Gene family) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g27540
Cluster HCCA cluster: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT3G29110 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Gene family
AT4G13280 ATTPS12, TPS12 terpenoid synthase 12 0.02 Gene family
AT4G20200 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Gene family
GSVIVT01036322001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
GSVIVT01036343001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036361001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036366001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036371001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036373001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036374001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os01g23530 Os01g0337100 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
LOC_Os03g22634 Os03g0348200 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
LOC_Os03g24690 Os03g0361700,... 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
LOC_Os03g31430 Os03g0428200 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
LOC_Os04g27070 Os04g0339500 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os04g27190 Os04g0340300 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os04g27340 Os04g0341500 16.1.5 secondary metabolism.isoprenoids.terpenoids In... 0.04 Gene family
LOC_Os04g27400 Os04g0341800 16.1.5 secondary metabolism.isoprenoids.terpenoids In... 0.05 Gene family
LOC_Os04g27790 Os04g0345400 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os05g16980 No alias No description available 0.04 Gene family
LOC_Os05g24500 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family
LOC_Os07g11790 Os07g0218200 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.01 Gene family
LOC_Os08g04500 Os08g0139700 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.05 Gene family
LOC_Os08g07100 Os08g0168000 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os08g07120 Os08g0168400 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
Smo407280 PACid_15417529 No description available 0.03 Gene family
Solyc04g051620.2.1 Solyc04g051620.2 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc04g054380.1.1 Solyc04g054380.1 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc06g059885.1.1 Solyc06g059885.1 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc07g008690.3.1 Solyc07g008690.3 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Solyc07g052135.1.1 Solyc07g052135.1 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
Zm00001d024207 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan
MF GO:0010333 terpene synthase activity IEA InterProScan
MF GO:0016829 lyase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 31 138
IPR005630 Terpene_synthase_metal-bd 180 442
No external refs found!