1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e042037_P001

Zm00001e042037_P001 (RPS2, Zm00001e042037)


Aliases : RPS2, Zm00001e042037

Description : 30S ribosomal protein S2, chloroplastic OS=Zea mays (sp|p16037|rr2_maize : 263.0)


Gene families : OG0003809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003809_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042037_P001
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
ATCG00160 RPS2 ribosomal protein S2 0.04 OrthoFinder output from all 47 species
Aev_g16539 RPS2 component *(uS2c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Als_g16619 RPS2 component *(uS2c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.01G105400.1 RPS2, Ceric.01G105400 component *(uS2c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.1Z023000.1 RPS2, Ceric.1Z023000 component *(uS2c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.38G010300.1 RPS2, Ceric.38G010300 component *(uS2c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g24434 RPS2 component *(uS2c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os02g24612.1 RPS2, LOC_Os02g24612 component psRPS2 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
LOC_Os10g38278.1 RPS2, LOC_Os10g38278 component psRPS2 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Lfl_g12065 No alias component *(uS2m) of small mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e042272_P001 RPS2, Zm00001e042272 component psRPS2 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 63 175
No external refs found!