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  5. Zm00001e041785_P001

Zm00001e041785_P001 (WOX4, Zm00001e041785)


Aliases : WOX4, Zm00001e041785

Description : transcription factor (WOX)


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041785_P001
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00181320 WOX3, PRS1, PRS,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00051p00020930 WOX4,... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
AMTR_s00405p00009920 WUS, PGA6, WUS1,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT1G46480 WOX4 WUSCHEL related homeobox 4 0.07 OrthoFinder output from all 47 species
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.03 OrthoFinder output from all 47 species
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.03 OrthoFinder output from all 47 species
AT5G05770 WOX7 WUSCHEL related homeobox 7 0.06 OrthoFinder output from all 47 species
Adi_g053615 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49881.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0014.g013545 WOX12 WOX-type transcription factor & original description: CDS=21-1280 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038164 STPL, WOX8 WOX-type transcription factor & original description: CDS=39-1451 0.03 OrthoFinder output from all 47 species
Ceric.19G009200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G012000.1 WUS, PGA6, WUS1,... WOX-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g30680 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29650 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008424001 WOX1 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01009453001 WOX4 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01025075001 WOX3, PRS1, PRS RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Gb_05339 WOX4 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Gb_12565 WOX4 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
LOC_Os01g63510.1 WOX5, LOC_Os01g63510 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g02730.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
LOC_Os05g48990.1 STIP, HB-3,... transcription factor (WOX) 0.07 OrthoFinder output from all 47 species
MA_10344604g0010 STIP, HB-3, WOX9 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_121643g0010 WOX4 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_747816g0010 STPL, WOX8 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_8832398g0010 WOX2 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Solyc04g078650.4.1 WOX4, Solyc04g078650 transcription factor (WOX) 0.07 OrthoFinder output from all 47 species
Zm00001e006644_P002 WUS, PGA6, WUS1,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Zm00001e009121_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Zm00001e019245_P001 WOX5, Zm00001e019245 transcription factor (WOX) 0.01 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.06 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.05 OrthoFinder output from all 47 species
Zm00001e028720_P001 WOX5, Zm00001e028720 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Zm00001e029534_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.06 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 101 160
No external refs found!