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  5. Zm00001e041755_P001

Zm00001e041755_P001 (DRD2, NRPE2, NRPD2A,...)


Aliases : DRD2, NRPE2, NRPD2A, NRPD2, DMS2, Zm00001e041755

Description : subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V RNA polymerase


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041755_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00247890 NRPC2,... DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g17610 EMB1989, RPB2, NRPB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g039092 EMB1989, RPB2, NRPB2 not classified & original description: CDS=1-1137 0.03 OrthoFinder output from all 47 species
GSVIVT01035963001 DRD2, NRPE2,... RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species
LOC_Os04g54840.1 DRD2, NRPE2,... subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... 0.02 OrthoFinder output from all 47 species
Len_g16317 EMB1989, RPB2, NRPB2 component *(NRPB2) of RNA polymerase II complex &... 0.01 OrthoFinder output from all 47 species
Msp_g14155 EMB1989, RPB2, NRPB2 component *(NRPB2) of RNA polymerase II complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g39106 DRD2, NRPE2,... component *(NRPE2) of RNA polymerase V complex &... 0.04 OrthoFinder output from all 47 species
Pir_g55088 EMB1989, RPB2, NRPB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c3_35890V3.1 Pp3c3_35890 DNA-directed RNA polymerase family protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007646 RNA_pol_Rpb2_4 625 686
IPR007642 RNA_pol_Rpb2_2 324 452
IPR007120 DNA-dir_RNAP_su2_dom 756 1126
IPR007641 RNA_pol_Rpb2_7 1128 1226
IPR007644 RNA_pol_bsu_protrusion 103 500
IPR007647 RNA_pol_Rpb2_5 701 747
IPR007645 RNA_pol_Rpb2_3 529 589
No external refs found!