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  5. Zm00001e041446_P005

Zm00001e041446_P005 (LHW, Zm00001e041446)


Aliases : LHW, Zm00001e041446

Description : Transcription factor LHW OS=Arabidopsis thaliana (sp|q9xin0|lhw_arath : 232.0)


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041446_P005
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00261730 CPUORF7,... Transcription factor LHW OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00042170 LHW,... Transcription factor LHW OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G06150 EMB1444 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G27230 LHW transcription factor-related 0.04 OrthoFinder output from all 47 species
Aev_g07333 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30832 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11500 CPUORF7 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26633 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14103 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61379 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13571 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22156 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G054500.1 LHW, Ceric.19G054500 LHW/LHL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.24G018600.1 LHW, Ceric.24G018600 LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01539 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11990 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019626001 LHW Transcription factor LHW OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037572001 LHW Transcription factor LHW OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_21142 EMB1444 Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os02g45170.1 LHW, LOC_Os02g45170 Transcription factor LHW OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g06010.1 LHW, LOC_Os11g06010 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g14794 No alias LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_18030g0010 LHW transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp7g02370.1 LHW Transcription factor LHW OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g24642 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24313 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39238 EMB1444 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40326 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07449 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27140 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020053 LHW LHW/LHL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc06g074110.3.1 LHW, Solyc06g074110 Transcription factor LHW OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc09g011170.3.1 EMB1444, Solyc09g011170 Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e032637_P002 LHW, Zm00001e032637 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 46 142
No external refs found!