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  5. Zm00001e041427_P001

Zm00001e041427_P001 (AtPP2-A13, PP2-A13,...)


Aliases : AtPP2-A13, PP2-A13, Zm00001e041427

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041427_P001
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.02 OrthoFinder output from all 47 species
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.06 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.04 OrthoFinder output from all 47 species
AT2G02310 AtPP2-B6, PP2-B6 phloem protein 2-B6 0.05 OrthoFinder output from all 47 species
AT2G02350 AtPP2-B9, SKIP3 SKP1 interacting partner 3 0.01 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.03 OrthoFinder output from all 47 species
AT5G52120 PP2-A14, AtPP2-A14 phloem protein 2-A14 0.02 OrthoFinder output from all 47 species
Aev_g08542 PP2-A15, AtPP2-A15 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene55186.t1 AtPP2-B8,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55189.t1 Aspi01Gene55189 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55189.t2 ATPP2-A4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.03 OrthoFinder output from all 47 species
Cba_g09552 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21011 ATPP2-B11, PP2-B11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003898001 AtPP2-B10, PP2-B10 Putative F-box protein PP2-B12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01003900001 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019353001 ATPP2-A4, PP2-A4 Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g56810.1 AtPP2-B2,... no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g34827 ATPP2-A5, PP2-A5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430103g0010 AtPP2-B10, PP2-B10 F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434357g0020 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10437012g0010 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_179528g0010 MEE66 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_22084g0010 MEE66 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_413510g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_5038g0010 ATPP2-B11, PP2-B11 F-box protein PP2-B11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g08180.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g04570 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25366 AtPP2-B12, PP2-B12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39207 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100010.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc04g050990.3.1 MEE66, Solyc04g050990 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g056680.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g055870.3.1 MEE66, Solyc05g055870 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g017960.2.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Solyc10g085490.3.1 PP2-A15,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Solyc12g096890.1.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g17453 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034748_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025886 PP2-like 109 271
No external refs found!