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  5. Zm00001e041403_P001

Zm00001e041403_P001 (Zm00001e041403)


Aliases : Zm00001e041403

Description : transcription factor (bHLH)


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041403_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.06 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G22490 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G46690 bHLH071 beta HLH protein 71 0.03 OrthoFinder output from all 47 species
Ala_g25773 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03090 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10378 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15692 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27262 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04490 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09821 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18861.t1 FMA, Aspi01Gene18861 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38670.t1 FMA, Aspi01Gene38670 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50659.t1 FMA, Aspi01Gene50659 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53774.t1 SPCH, Aspi01Gene53774 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60129.t1 FMA, Aspi01Gene60129 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010552 FMA bHLH-type transcription factor & original description: CDS=1-1698 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048899 MUTE bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g06394 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G023000.1 FMA, Ceric.17G023000 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G040300.1 Ceric.21G040300 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.23G002400.1 FMA, Ceric.23G002400 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.26G015300.1 Ceric.26G015300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g12824 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02905 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g04681 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05220 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05942 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21962 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30290 FMA bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009097001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01021074001 FMA RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01027446001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
Gb_01096 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_17233 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os02g15760.1 SPCH, LOC_Os02g15760 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46560.1 LOC_Os02g46560 transcription factor (bHLH) 0.09 OrthoFinder output from all 47 species
LOC_Os03g03000.1 LOC_Os03g03000 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os04g50090.1 LOC_Os04g50090 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
LOC_Os05g50900.1 FMA, LOC_Os05g50900 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os08g37730.1 LOC_Os08g37730 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
LOC_Os09g29360.1 LOC_Os09g29360 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
MA_120602g0010 SPCH transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_194157g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_57244g0010 FMA transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_686524g0010 FMA transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g31314 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33721 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63342 FMA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63346 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000446 No alias bHLH-type transcription factor & original description: CDS=1-1233 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012172 FMA bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013314 FMA bHLH-type transcription factor & original description: CDS=1-1482 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021350 FMA bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026171 No alias bHLH-type transcription factor & original description: CDS=1-975 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026173 MUTE not classified & original description: CDS=1-492 0.03 OrthoFinder output from all 47 species
Smo91359 FMA RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Solyc01g080050.4.1 MUTE, Solyc01g080050 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc03g007410.4.1 SPCH, Solyc03g007410 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc05g053660.3.1 FMA, Solyc05g053660 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc09g091760.3.1 FMA, Solyc09g091760 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g47856 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07072 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24400 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000161_P002 Zm00001e000161 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e000657_P002 Zm00001e000657 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e009989_P001 Zm00001e009989 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e023271_P001 Zm00001e023271 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e034422_P002 Zm00001e034422 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e037075_P001 SPCH, Zm00001e037075 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 80 131
No external refs found!