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  5. Zm00001e041389_P001

Zm00001e041389_P001 (CYCT1;4, Zm00001e041389)


Aliases : CYCT1;4, Zm00001e041389

Description : cyclin (CYCT). regulatory component of CTDK-I polymerase-II kinase complex


Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041389_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT4G19600 CYCT1;4 Cyclin family protein 0.05 OrthoFinder output from all 47 species
Adi_g060883 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ala_g21091 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aob_g06020 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Aop_g02220 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g08325 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Aspi01Gene16249.t1 Aspi01Gene16249 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.09G013400.1 CYCT1;4, Ceric.09G013400 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
LOC_Os12g30020.2 CYCT1;4, LOC_Os12g30020 cyclin (CYCT). regulatory component of CTDK-I... 0.03 OrthoFinder output from all 47 species
Len_g05375 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Msp_g24619 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Smo106266 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 37 178
No external refs found!