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  5. Zm00001e041335_P001

Zm00001e041335_P001 (Zm00001e041335)


Aliases : Zm00001e041335

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041335_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G10240 No alias B-box zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT4G38960 No alias B-box type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Aev_g03048 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08384.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g008055 LZF1, STH3, DBB3 BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.11G021600.1 Ceric.11G021600 BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.24G058800.1 STO, Ceric.24G058800 BBX class-IV transcription factor & original... 0.05 OrthoFinder output from all 47 species
Dde_g05802 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g43170.1 LOC_Os02g43170 transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species
LOC_Os04g45690.1 LOC_Os04g45690 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
LOC_Os12g10660.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Solyc12g089240.2.1 STH2, Solyc12g089240 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
Zm00001e013262_P001 Zm00001e013262 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Zm00001e023122_P002 STH2, Zm00001e023122 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 44
IPR000315 Znf_B-box 57 99
No external refs found!