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  5. Zm00001e041322_P001

Zm00001e041322_P001 (AFO, YAB1, FIL, Zm00001e041322)


Aliases : AFO, YAB1, FIL, Zm00001e041322

Description : transcription factor (YABBY)


Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041322_P001
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 YAB2,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00032940 AFO, YAB1, FIL,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00096p00054100 YAB5,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.05 OrthoFinder output from all 47 species
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.07 OrthoFinder output from all 47 species
GSVIVT01012246001 CRC RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Gb_22423 YAB5 transcription factor (YABBY) 0.08 OrthoFinder output from all 47 species
LOC_Os02g42950.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.12 OrthoFinder output from all 47 species
LOC_Os04g45330.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.12 OrthoFinder output from all 47 species
LOC_Os10g36420.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Solyc01g010240.3.1 CRC, Solyc01g010240 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species
Solyc01g091010.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.13 OrthoFinder output from all 47 species
Solyc08g079100.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.07 OrthoFinder output from all 47 species
Solyc11g071810.2.1 YAB2, Solyc11g071810 transcription factor (YABBY) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006780 YABBY 23 224
No external refs found!