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  5. Zm00001e041317_P001

Zm00001e041317_P001 (PVA12, Zm00001e041317)


Aliases : PVA12, Zm00001e041317

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041317_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g058676 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Aev_g05136 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Ala_g18518 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Als_g26658 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
Als_g49608 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Ehy_g28468 PVA12 contact site protein (VAP27) of... 0.04 OrthoFinder output from all 47 species
GSVIVT01001317001 PVA12 Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Solyc01g067720.4.1 VAP27-2, Solyc01g067720 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Solyc01g090910.3.1 PVA12, Solyc01g090910 contact site protein (VAP27) of... 0.05 OrthoFinder output from all 47 species
Zm00001e014355_P001 Zm00001e014355 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000535 MSP_dom 9 112
No external refs found!