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  5. Zm00001e040854_P001

Zm00001e040854_P001 (CMPG2, ATCMPG2, Zm00001e040854)


Aliases : CMPG2, ATCMPG2, Zm00001e040854

Description : U-box domain-containing protein 29 OS=Arabidopsis thaliana (sp|q9lsa6|pub29_arath : 117.0)


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040854_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00130440 CMPG2, ATCMPG2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00159240 PUB23,... E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00043p00215340 PUB8, B80,... U-box domain-containing protein 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00038840 PUB22,... E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00138p00053700 evm_27.TU.AmTr_v1... U-box domain-containing protein 21 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT3G52450 PUB22 plant U-box 22 0.03 OrthoFinder output from all 47 species
Adi_g107693 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06990 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20026 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30969 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61569 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04412 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18452.t1 PUB25, Aspi01Gene18452 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18453.t1 PUB25, Aspi01Gene18453 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27391.t1 PUB26, Aspi01Gene27391 U-Box-group-III E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51617.t1 PUB15, Aspi01Gene51617 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51618.t1 PUB15, Aspi01Gene51618 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51619.t1 PUB15, Aspi01Gene51619 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g038964 PUB25 U-Box-group-III E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G065500.1 PUB26, Ceric.08G065500 U-Box-group-III E3 ubiquitin ligase & original... 0.05 OrthoFinder output from all 47 species
Ceric.10G007700.1 PUB23, Ceric.10G007700 not classified & original description: pacid=50612519... 0.03 OrthoFinder output from all 47 species
Ceric.1Z056500.1 PUB26, Ceric.1Z056500 U-Box-group-III E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Ceric.21G081600.1 PUB26, Ceric.21G081600 U-Box-group-III E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Ceric.25G045400.1 Ceric.25G045400 not classified & original description: pacid=50593359... 0.02 OrthoFinder output from all 47 species
Dac_g07515 PUB25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01209 PUB23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01521 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04516 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22421 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31575 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46168 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16036 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011139001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01011140001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01011616001 CMPG1, ATCMPG1 U-box domain-containing protein 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01026542001 CMPG2, ATCMPG2 U-box domain-containing protein 27 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_02628 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_02629 No alias U-box domain-containing protein 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_19502 PUB23 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_27794 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_29851 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g34140.1 PUB29, ATPUB29,... E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
LOC_Os04g49970.1 PUB23, LOC_Os04g49970 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g13870.1 LOC_Os06g13870 U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06410.1 PUB24, LOC_Os12g06410 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g16219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g31416 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22781 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_126399g0010 PUB26 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_33190g0010 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g06090.1 PUB25 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Mp3g22750.1 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g11599 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36530 PUB23 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12470 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011093 PUB23 not classified & original description: CDS=1-1278 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015794 PUB26 U-Box-group-III E3 ubiquitin ligase & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018296 PUB8, B80 not classified & original description: CDS=1-1353 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023196 PUB26 not classified & original description: CDS=1-1080 0.02 OrthoFinder output from all 47 species
Solyc01g009320.2.1 PUB23, Solyc01g009320 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g008100.3.1 Solyc04g008100 U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g071030.1.1 Solyc04g071030 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Solyc11g005700.1.1 CMPG2, ATCMPG2,... E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
Spa_g47017 PUB23 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000999_P001 Zm00001e000999 U-box domain-containing protein 20 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e007109_P001 PUB23, Zm00001e007109 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e015763_P001 Zm00001e015763 U-box domain-containing protein 21 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e036030_P001 Zm00001e036030 U-box domain-containing protein 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e039417_P001 PUB23, Zm00001e039417 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 21 90
No external refs found!