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  5. Zm00001e040776_P001

Zm00001e040776_P001 (AFB2, Zm00001e040776)


Aliases : AFB2, Zm00001e040776

Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040776_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G12820 AFB3 auxin signaling F-box 3 0.03 OrthoFinder output from all 47 species
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.05 OrthoFinder output from all 47 species
AT5G49980 AFB5 auxin F-box protein 5 0.04 OrthoFinder output from all 47 species
Adi_g056234 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04138 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00665.t1 AFB2, Aspi01Gene00665 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07329 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Dac_g10679 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ehy_g07930 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Gb_04516 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Lfl_g06163 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
MA_121693g0010 AFB5 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_646265g0010 COI1 Coronatine-insensitive protein homolog 1a OS=Oryza... 0.04 OrthoFinder output from all 47 species
MA_78902g0010 AFB5 component TIR1/AFB of auxin receptor complex 0.03 OrthoFinder output from all 47 species
Mp2g26590.1 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014055 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Smo104859 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc04g074980.3.1 AFB5, Solyc04g074980 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Spa_g50974 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Tin_g03442 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 61 107
IPR041567 COI1_F-box 2 41
No external refs found!