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  5. Zm00001e040752_P001

Zm00001e040752_P001 (Zm00001e040752)


Aliases : Zm00001e040752

Description : transcription factor (CAMTA)


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040752_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 CAMTA3, SR1,... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
Dcu_g14147 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g69910.1 LOC_Os01g69910 transcription factor (CAMTA) 0.05 OrthoFinder output from all 47 species
Lfl_g03420 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13009 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g035520.3.1 Solyc12g035520 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002909 IPT_dom 422 494
IPR005559 CG-1_dom 13 126
IPR000048 IQ_motif_EF-hand-BS 853 873
IPR000048 IQ_motif_EF-hand-BS 831 849
IPR020683 DUF3447 637 710
No external refs found!