LOC_Os04g24790


Description : 27.3.24 RNA.regulation of transcription.MADS box transcription factor family AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function. AGAMOUS-like 80 (AGL80)


Gene families : OG_01_0000805 (Gene family) Phylogenetic Tree(s): OG0000805_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g24790
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT5G26630 No alias MADS-box transcription factor family protein 0.02 Gene family
AT5G26650 AGL36 AGAMOUS-like 36 0.03 Gene family
GSVIVT01031333001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
Zm00001d048894 GRMZM2G099408 27.3.24 RNA.regulation of transcription.MADS box... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 14 38
No external refs found!