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Aliases : Zm00001e040624
Description : pectate lyase
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e040624_P001 | |
| Cluster | HCCA: Cluster_2 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| AT1G67750 | No alias | Pectate lyase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G54920 | PMR6 | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G04310 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g013762 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g38995 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16408 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g21580 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12080.t1 | Aspi01Gene12080 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033610 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=200-1411 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0123.g048430 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=163-1392 | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G068000.1 | Ceric.22G068000 | EC_4.2 carbon-oxygen lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G051100.1 | RHS14, Ceric.30G051100 | EC_4.2 carbon-oxygen lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G051200.1 | RHS14, Ceric.30G051200 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g12057 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43847 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g40377 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000592001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02248 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19802 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g12300.1 | AT59, LOC_Os02g12300 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g05050.1 | LOC_Os04g05050 | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g38510.2 | LOC_Os06g38510 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10584 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10205415g0010 | No alias | pectate lyase | 0.07 | OrthoFinder output from all 47 species | |
| MA_10428603g0020 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433252g0020 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10437227g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_203992g0010 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| MA_62112g0010 | No alias | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| MA_91467g0010 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g01000.1 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g10190.1 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26215 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28391 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41164 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41165 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g27506 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c17_16370V3.1 | Pp3c17_16370 | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06396 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14736 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g27978 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39754 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g010740.4.1 | AT59, Solyc01g010740 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g093580.4.1 | Solyc02g093580 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g058890.4.1 | AT59, Solyc03g058890 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g007080.4.1 | AT59, Solyc05g007080 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g071840.3.1 | Solyc06g071840 | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g083580.4.1 | Solyc06g083580 | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g008380.3.1 | Solyc09g008380 | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g061890.3.1 | Solyc09g061890 | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g008140.3.1 | Solyc11g008140 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g41522 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47003 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g57258 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g09317 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024959_P001 | AT59, Zm00001e024959 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029999_P001 | Zm00001e029999 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e037311_P001 | Zm00001e037311 | pectate lyase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 200 | 381 |
| No external refs found! |