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  5. Zm00001e040514_P001

Zm00001e040514_P001 (Zm00001e040514)


Aliases : Zm00001e040514

Description : ubiquitin protein ligase (WAV3)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040514_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.04 OrthoFinder output from all 47 species
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.05 OrthoFinder output from all 47 species
Als_g15196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25613.t1 Aspi01Gene25613 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46085.t1 Aspi01Gene46085 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56860.t1 Aspi01Gene56860 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035638 No alias not classified & original description: CDS=1-2802 0.03 OrthoFinder output from all 47 species
Ceric.24G014600.1 Ceric.24G014600 not classified & original description: pacid=50629291... 0.04 OrthoFinder output from all 47 species
GSVIVT01003713001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01603 No alias ubiquitin protein ligase (WAV3) 0.02 OrthoFinder output from all 47 species
LOC_Os02g40664.1 LOC_Os02g40664 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g01160.1 LOC_Os04g01160 ubiquitin protein ligase (WAV3) 0.06 OrthoFinder output from all 47 species
LOC_Os08g03270.1 LOC_Os08g03270 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g32740.1 LOC_Os10g32740 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g21346 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g24093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000344_P001 Zm00001e000344 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e004621_P001 Zm00001e004621 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e012729_P001 Zm00001e012729 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 128 157
IPR002035 VWF_A 312 430
No external refs found!