- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e040240
Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface
Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G60600 | VAP27, VAP27-1,... | vesicle associated protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058676 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080054 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g085923 | PVA12 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g088258 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102804 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g02457 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g27802 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g06823 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017816001 | PVA12 | Vesicle-associated protein 1-2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_34621 | No alias | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g05890.1 | LOC_Os08g05890 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Smo438734 | PVA12 | Vesicle-associated protein 1-2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g078000.3.1 | Solyc08g078000 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g078690.3.1 | PVA12, Solyc08g078690 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007051 | spindle organization | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031023 | microtubule organizing center organization | IEP | HCCA |
| BP | GO:0051225 | spindle assembly | IEP | HCCA |
| BP | GO:0070925 | organelle assembly | IEP | HCCA |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000535 | MSP_dom | 10 | 112 |
| No external refs found! |