Zm00001e040120_P001 (Zm00001e040120)

Aliases : Zm00001e040120

Description : mCSF mitochondrial RNA splicing factor

Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e040120_P001

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT4G31010	No alias	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	0.02	OrthoFinder output from all 47 species
Dde_g31766	ATCAF1, CAF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	285	368
IPR001890	RNA-binding_CRM	167	250

External Links

No external refs found!