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  5. Zm00001e039983_P001

Zm00001e039983_P001 (Zm00001e039983)


Aliases : Zm00001e039983

Description : no hits & (original description: none)


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039983_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00229380 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT5G52480 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene01223.t1 SKIP1, Aspi01Gene01223 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.04 OrthoFinder output from all 47 species
Cba_g31460 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g09947 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g03280 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.05 OrthoFinder output from all 47 species
GSVIVT01021579001 No alias F-box protein SKIP19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g52130.5 FBW2, LOC_Os02g52130 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Mp2g10300.1 No alias F-box protein SKIP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g07000.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species
Mp5g21020.1 No alias F-box protein SKIP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g21960.1 No alias F-box protein FBW2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g21970.1 No alias F-box protein SKIP1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp7g10170.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Pir_g22034 FBW2 substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Pir_g44703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g013790.2.1 Solyc08g013790 F-box protein SKIP19 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g02614 SKIP1 substrate adaptor of SCF E3 ubiquiTin ligase complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 10 58
No external refs found!