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  5. Zm00001e039775_P001

Zm00001e039775_P001 (STI, Zm00001e039775)


Aliases : STI, Zm00001e039775

Description : Protein STICHEL OS=Arabidopsis thaliana (sp|o64728|sti_arath : 655.0)


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039775_P001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00247620 STI,... Protein STICHEL OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00099080 evm_27.TU.AmTr_v1... Protein STICHEL-like 4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT4G24790 No alias AAA-type ATPase family protein 0.04 OrthoFinder output from all 47 species
AT5G45720 No alias AAA-type ATPase family protein 0.02 OrthoFinder output from all 47 species
Adi_g011687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17046 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27520 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15002 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15458 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62844 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17354 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17547 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18308 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19008 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18920.t1 Aspi01Gene18920 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24416.t1 STI, Aspi01Gene24416 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28417.t1 STI, Aspi01Gene28417 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene35944.t2 STI, Aspi01Gene35944 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53747.t1 Aspi01Gene53747 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59566.t1 STI, Aspi01Gene59566 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015008 STI not classified & original description: CDS=518-3727 0.05 OrthoFinder output from all 47 species
Azfi_s0121.g046910 No alias not classified & original description: CDS=103-2460 0.04 OrthoFinder output from all 47 species
Azfi_s0349.g066519 STI not classified & original description: CDS=305-3841 0.03 OrthoFinder output from all 47 species
Cba_g12073 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g12772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14646 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19914 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26969 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g39055 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G036000.1 STI, Ceric.14G036000 not classified & original description: pacid=50633102... 0.05 OrthoFinder output from all 47 species
Ceric.18G081700.1 STI, Ceric.18G081700 not classified & original description: pacid=50622228... 0.03 OrthoFinder output from all 47 species
Ceric.19G039400.1 Ceric.19G039400 not classified & original description: pacid=50576420... 0.04 OrthoFinder output from all 47 species
Ceric.23G075900.1 STI, Ceric.23G075900 not classified & original description: pacid=50610074... 0.02 OrthoFinder output from all 47 species
Ceric.34G046100.1 STI, Ceric.34G046100 not classified & original description: pacid=50623739... 0.03 OrthoFinder output from all 47 species
Dac_g43950 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12024 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12337 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19715 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08668 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007580001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01023130001 STI Protein STICHEL OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os01g53070.1 LOC_Os01g53070 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os08g02670.1 LOC_Os08g02670 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g13990.1 STI, LOC_Os11g13990 Protein STICHEL OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os12g10670.1 STI, LOC_Os12g10670 Protein STICHEL OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g19180.1 LOC_Os12g19180 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Len_g10749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12576 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30222 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_34437g0020 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g13040.1 STI Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g14718 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31515 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08449 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25300 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27279 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11847 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32633 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58288 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58662 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11006 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60107 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008500 No alias iron-sulphur component *(SDH2) of succinate... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009303 STI not classified & original description: CDS=791-4738 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010327 No alias not classified & original description: CDS=516-4208 0.02 OrthoFinder output from all 47 species
Sam_g07965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22669 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g40290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo2945 STI Protein STICHEL OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g072090.2.1 Solyc02g072090 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g04713 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17175 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24966 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007784_P001 Zm00001e007784 Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e019906_P002 Zm00001e019906 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 670 727
No external refs found!