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  5. Zm00001e039734_P001

Zm00001e039734_P001 (Zm00001e039734)


Aliases : Zm00001e039734

Description : component Sm-E of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG0007427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039734_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g022466 No alias component *(Sm-E) of U1/U2/U4/U5-associated Sm accessory... 0.01 OrthoFinder output from all 47 species
Aspi01Gene28255.t1 Aspi01Gene28255 component *(Sm-E) of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species
Ceric.12G097200.1 Ceric.12G097200 component *(Sm-E) of U1/U2/U4/U5-associated Sm accessory... 0.09 OrthoFinder output from all 47 species
Cre08.g385200 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Pir_g13139 No alias component *(Sm-E) of U1/U2/U4/U5-associated Sm accessory... 0.01 OrthoFinder output from all 47 species
Pp3c14_15210V3.1 Pp3c14_15210 Small nuclear ribonucleoprotein family protein 0.01 OrthoFinder output from all 47 species
Smo230895 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 OrthoFinder output from all 47 species
Solyc03g098470.3.1 Solyc03g098470 component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!