Aliases : UBP12, Zm00001e039540
Description : ubiquitin protease (USP7). deubiquitinase (UBP12-13)
Gene families : OG0001048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001048_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00004p00140970 | UBP13,... | Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
AT3G11910 | UBP13 | ubiquitin-specific protease 13 | 0.05 | OrthoFinder output from all 47 species | |
AT5G06600 | UBP12 | ubiquitin-specific protease 12 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g022452 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g058359 | UBP13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g058360 | UBP13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g060998 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g076953 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g109500 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g06794 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g21287 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ala_g16236 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ala_g19646 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g11910 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Als_g18908 | UBP13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g29323 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g32969 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g04496 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g20270 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene13913.t1 | UBP12, Aspi01Gene13913 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene19498.t1 | UBP13, Aspi01Gene19498 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene53263.t1 | UBP12, Aspi01Gene53263 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14539 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g16251 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G077200.1 | UBP13, Ceric.04G077200 | deubiquitinase *(UBP12-13) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.13G025300.1 | UBP13, Ceric.13G025300 | deubiquitinase *(UBP12-13) & original description:... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.14G040100.1 | UBP12, Ceric.14G040100 | deubiquitinase *(UBP12-13) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G037500.1 | UBP12, Ceric.24G037500 | deubiquitinase *(UBP12-13) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000217.46 | UBP12 | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021350.29 | UBP13 | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021350.30 | UBP12 | Protein degradation.peptidase families.cysteine-type... | 0.02 | OrthoFinder output from all 47 species | |
Cre07.g336200 | UBP12 | Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g06495 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g50110 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g08217 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g25656 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01022498001 | UBP12 | Protein degradation.peptidase families.cysteine-type... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01034603001 | UBP12 | Protein degradation.peptidase families.cysteine-type... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037528001 | UBP12 | Protein degradation.peptidase families.cysteine-type... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04866 | UBP13 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.03 | OrthoFinder output from all 47 species | |
Gb_34568 | UBP13 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g56490.1 | UBP13, LOC_Os01g56490 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g06950.1 | UBP12, LOC_Os07g06950 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os11g36470.1 | UBP13, LOC_Os11g36470 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os12g30540.1 | UBP12, LOC_Os12g30540 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.07 | OrthoFinder output from all 47 species | |
Len_g23299 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05026 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g40373 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10426331g0010 | UBP12 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.03 | OrthoFinder output from all 47 species | |
MA_10427483g0010 | UBP12 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.02 | OrthoFinder output from all 47 species | |
MA_10427483g0020 | UBP13 | deubiquitinase (UBP12-13) | 0.04 | OrthoFinder output from all 47 species | |
MA_32639g0010 | UBP12 | ubiquitin protease (USP7) | 0.04 | OrthoFinder output from all 47 species | |
MA_75085g0010 | UBP13 | deubiquitinase (UBP12-13) | 0.04 | OrthoFinder output from all 47 species | |
Mp3g15430.1 | UBP12 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g40484 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pir_g01064 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g16380 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g16929 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g18625 | No alias | deubiquitinase *(UBP12-13) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Smo444302 | UBP12 | Protein degradation.peptidase families.cysteine-type... | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g055090.4.1 | UBP12, Solyc05g055090 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g081610.2.1 | UBP12, Solyc10g081610 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g071700.2.1 | UBP12, Solyc11g071700 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.05 | OrthoFinder output from all 47 species | |
Spa_g06287 | UBP12 | deubiquitinase *(UBP12-13) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29818 | UBP13 | deubiquitinase *(UBP12-13) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019687_P003 | UBP13, Zm00001e019687 | ubiquitin protease (USP7). deubiquitinase (UBP12-13) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0016579 | protein deubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |