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  5. Zm00001e039539_P003

Zm00001e039539_P003 (Zm00001e039539)


Aliases : Zm00001e039539

Description : R-loop reader protein (ALBA1/2)


Gene families : OG0001187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039539_P003

Target Alias Description ECC score Gene Family Method Actions
Adi_g051544 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014774 No alias R-loop reader protein *(ALBA1/2) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g16772 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Cre09.g401600 No alias Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os12g30550.1 LOC_Os12g30550 R-loop reader protein (ALBA1/2) 0.07 OrthoFinder output from all 47 species
Len_g04493 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12690 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g097050.4.1 Solyc01g097050 R-loop reader protein (ALBA1/2) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 87 147
No external refs found!