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  5. Zm00001e039538_P001

Zm00001e039538_P001 (Zm00001e039538)


Aliases : Zm00001e039538

Description : C3H zinc finger transcription factor


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039538_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00248880 ZFN1,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
AMTR_s00074p00110430 ZFN2,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Adi_g017415 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35283.t1 ZFN1, Aspi01Gene35283 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene56524.t1 Aspi01Gene56524 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.28G038200.1 Ceric.28G038200 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007563001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Gb_02527 ZFN1 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os01g15350.1 LOC_Os01g15350 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_1139g0010 ZFN1 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_137427g0010 ZFN1 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Pp3c26_12270V3.1 ZFN1, Pp3c26_12270 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.01 OrthoFinder output from all 47 species
Solyc06g071860.3.1 Solyc06g071860 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 302 326
IPR000571 Znf_CCCH 255 277
IPR000571 Znf_CCCH 108 132
No external refs found!