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Aliases : Zm00001e039393
Description : transcription factor (RAV/NGATHA)
Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00238950 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00047p00199500 | EDF4, RAV1,... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g058439 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g114045 | NGA1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32030 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g44854 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04649 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G022700.1 | TEM1, EDF1,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22480 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39956 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g43760 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011947001 | EDF2, AtRAV2,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019699001 | NGA1 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g04800.1 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g01860.1 | LOC_Os06g01860 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g06120.1 | NGA1, LOC_Os08g06120 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g14264 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g36994 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g57809 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436315g0010 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
| MA_18923g0010 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | OrthoFinder output from all 47 species | |
| MA_3503583g0010 | NGA1 | transcription factor (RAV/NGATHA) | 0.04 | OrthoFinder output from all 47 species | |
| MA_3834g0010 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
| MA_5039g0010 | NGA1 | transcription factor (RAV/NGATHA) | 0.04 | OrthoFinder output from all 47 species | |
| MA_70029g0010 | NGA1 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
| MA_865117g0010 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g007000.2.1 | EDF4, RAV1,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g004000.1.1 | NGA1, Solyc05g004000 | transcription factor (RAV/NGATHA) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g013690.1.1 | NGA3, Solyc08g013690 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g083210.2.1 | Solyc10g083210 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28812 | EDF2, AtRAV2,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000156_P001 | NGA3, Zm00001e000156 | transcription factor (RAV/NGATHA) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e016956_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032325_P001 | EDF2, AtRAV2,... | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041372_P001 | NGA1, Zm00001e041372 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003340 | B3_DNA-bd | 41 | 133 |
| No external refs found! |