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  5. Zm00001e039271_P001

Zm00001e039271_P001 (RPT2, Zm00001e039271)


Aliases : RPT2, Zm00001e039271

Description : Root phototropism protein 2 OS=Arabidopsis thaliana (sp|q682s0|rpt2_arath : 262.0)


Gene families : OG0017031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0017031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039271_P001
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00161250 RPT2,... Root phototropism protein 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.07 OrthoFinder output from all 47 species
GSVIVT01024542001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os11g02610.1 RPT2, LOC_Os11g02610 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
LOC_Os12g02530.2 RPT2, LOC_Os12g02530 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc07g043130.3.1 RPT2, Solyc07g043130 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 228 484
No external refs found!