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  5. Zm00001e039077_P001

Zm00001e039077_P001 (Zm00001e039077)


Aliases : Zm00001e039077

Description : protein factor (NERD) of non-canonical RdDM pathway


Gene families : OG0001217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039077_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00244500 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 19... 0.04 OrthoFinder output from all 47 species
AT3G51120 No alias DNA binding;zinc ion binding;nucleic acid... 0.07 OrthoFinder output from all 47 species
Adi_g026023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107366 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.06 OrthoFinder output from all 47 species
Ala_g06673 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.05 OrthoFinder output from all 47 species
Ala_g35223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33241 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.02 OrthoFinder output from all 47 species
Aop_g08568 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Aop_g13646 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03548.t1 Aspi01Gene03548 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G099900.1 Ceric.09G099900 protein factor (NERD) of non-canonical RdDM pathway &... 0.07 OrthoFinder output from all 47 species
Dac_g09152 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.02 OrthoFinder output from all 47 species
Dcu_g02022 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g40973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018827001 No alias Zinc finger CCCH domain-containing protein 19... 0.03 OrthoFinder output from all 47 species
GSVIVT01024181001 No alias Zinc finger CCCH domain-containing protein 19... 0.09 OrthoFinder output from all 47 species
LOC_Os09g36090.1 LOC_Os09g36090 protein factor (NERD) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species
Len_g13930 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.02 OrthoFinder output from all 47 species
Lfl_g06273 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Lfl_g35904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_116694g0010 No alias Zinc finger CCCH domain-containing protein 19... 0.02 OrthoFinder output from all 47 species
Ore_g10283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16785 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.05 OrthoFinder output from all 47 species
Ore_g45456 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12625 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Ppi_g49417 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Ppi_g58382 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017691 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.04 OrthoFinder output from all 47 species
Sam_g52359 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.06 OrthoFinder output from all 47 species
Solyc02g084510.3.1 Solyc02g084510 Zinc finger CCCH domain-containing protein 44... 0.03 OrthoFinder output from all 47 species
Solyc03g033630.3.1 Solyc03g033630 Zinc finger CCCH domain-containing protein 44... 0.05 OrthoFinder output from all 47 species
Spa_g15744 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.02 OrthoFinder output from all 47 species
Spa_g30973 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.02 OrthoFinder output from all 47 species
Spa_g49491 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.03 OrthoFinder output from all 47 species
Tin_g09943 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.07 OrthoFinder output from all 47 species
Tin_g43997 No alias protein factor (NERD) of non-canonical RdDM pathway &... 0.04 OrthoFinder output from all 47 species
Zm00001e012555_P003 Zm00001e012555 protein factor (NERD) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species
Zm00001e027036_P001 Zm00001e027036 Zinc finger CCCH domain-containing protein 19... 0.02 OrthoFinder output from all 47 species
Zm00001e029059_P002 Zm00001e029059 protein factor (NERD) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003169 GYF 780 817
IPR003121 SWIB_MDM2_domain 353 426
IPR004343 Plus-3_dom 491 594
No external refs found!