Zm00001e038994_P002 (Zm00001e038994)


Aliases : Zm00001e038994

Description : no hits & (original description: none)


Gene families : OG0001497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038994_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270600 evm_27.TU.AmTr_v1... 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
AT2G16940 No alias Splicing factor, CC1-like 0.03 OrthoFinder output from all 47 species
AT5G09880 No alias Splicing factor, CC1-like 0.04 OrthoFinder output from all 47 species
Adi_g075755 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g103931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28379 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07014.t2 Aspi01Gene07014 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58033.t1 Aspi01Gene58033 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G027600.1 Ceric.27G027600 not classified & original description: pacid=50605291... 0.04 OrthoFinder output from all 47 species
Ceric.33G026000.1 Ceric.33G026000 not classified & original description: pacid=50607594... 0.03 OrthoFinder output from all 47 species
Cre04.g213905 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g20118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47761 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_11513 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_39308 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g05830.1 LOC_Os03g05830 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g30370.1 LOC_Os10g30370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g02031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g19710.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g15339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g005170.2.1 Solyc11g005170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g19702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR029123 RBM39_linker 352 459
IPR000504 RRM_dom 171 234
IPR000504 RRM_dom 263 333
No external refs found!