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  5. Zm00001e038984_P001

Zm00001e038984_P001 (ELF6, Zm00001e038984)


Aliases : ELF6, Zm00001e038984

Description : histone demethylase (PKDM9). transcription factor (JUMONJI)


Gene families : OG0004407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038984_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G48430 REF6 relative of early flowering 6 0.02 OrthoFinder output from all 47 species
Ala_g07663 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16153 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32477.t1 REF6, Aspi01Gene32477 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32480.t1 ELF6, Aspi01Gene32480 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17605 ELF6 histone demethylase *(PKDM9) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_39738 ELF6 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
LOC_Os03g05680.1 ELF6, LOC_Os03g05680 transcription factor (JUMONJI) 0.06 OrthoFinder output from all 47 species
Ppi_g18890 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g111590.4.1 REF6, Solyc03g111590 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 254 373
IPR003349 JmjN 28 61
No external refs found!