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  5. Zm00001e038839_P001

Zm00001e038839_P001 (AFB5, Zm00001e038839)


Aliases : AFB5, Zm00001e038839

Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038839_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 AFB2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00217840 COI1,... Phytohormones.jasmonic acid.perception and signal... 0.04 OrthoFinder output from all 47 species
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.02 OrthoFinder output from all 47 species
Als_g18642 TIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09039 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Cba_g03282 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Cba_g06119 TIR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45655 AFB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g70260 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.01G096900.1 AFB2, Ceric.01G096900 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.16G039600.1 AFB2, Ceric.16G039600 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.28G051500.1 AFB2, Ceric.28G051500 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Ceric.34G010500.1 AFB2, Ceric.34G010500 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
GSVIVT01010995001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_35123 AFB5 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
LOC_Os01g63420.1 COI1, LOC_Os01g63420 component COI of jasmonic acid receptor complex 0.04 OrthoFinder output from all 47 species
LOC_Os04g32460.1 AFB2, LOC_Os04g32460 component TIR1/AFB of auxin receptor complex. component... 0.07 OrthoFinder output from all 47 species
Len_g22721 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Lfl_g10546 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ore_g09474 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g15701 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Sam_g04852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15512 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sam_g27933 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Smo75487 AFB1, ATGRH1, GRH1 Phytohormones.jasmonic acid.perception and signal... 0.02 OrthoFinder output from all 47 species
Tin_g03442 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Zm00001e008324_P001 AFB2, Zm00001e008324 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Zm00001e015908_P001 Zm00001e015908 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 504 523
IPR001611 Leu-rich_rpt 313 326
IPR041101 Transp_inhibit 80 128
IPR041567 COI1_F-box 21 60
No external refs found!