1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e038828_P001

Zm00001e038828_P001 (AtRABA4a, RABA4a,...)


Aliases : AtRABA4a, RABA4a, Zm00001e038828

Description : A-class RAB GTPase


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038828_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G12160 RABA4D, ATRABA4D RAB GTPase homolog A4D 0.03 OrthoFinder output from all 47 species
AT5G65270 AtRABA4a, RABA4a RAB GTPase homolog A4A 0.05 OrthoFinder output from all 47 species
Ala_g00785 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09530 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0155.g053662 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: CDS=399-1052 0.06 OrthoFinder output from all 47 species
Dde_g04709 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g23100.1 AtRABA4a,... A-class RAB GTPase 0.11 OrthoFinder output from all 47 species
Len_g12448 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01882 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59186 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g064020.3.1 RABA4D,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc10g079030.2.1 RABA4D,... A-class RAB GTPase 0.06 OrthoFinder output from all 47 species
Solyc11g010100.2.1 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g09509 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e012878_P002 AtRABA4a,... A-class RAB GTPase 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 173
No external refs found!