Zm00001e038776_P001 (ARLA1C, ATARLA1C,...)

Aliases : ARLA1C, ATARLA1C, Zm00001e038776

Description : small GTPase (ARL8)

Gene families : OG0002135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e038776_P001

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000663.24	ATARFA1F, ARFA1F	ADP-ribosylation factor OS=Zea mays	0.01	OrthoFinder output from all 47 species
LOC_Os02g49980.1	ARLA1A,...	small GTPase (ARL8)	0.03	OrthoFinder output from all 47 species
LOC_Os03g10370.1	ARLA1C,...	small GTPase (ARL8)	0.04	OrthoFinder output from all 47 species
MA_14901g0010	ARLA1C, ATARLA1C	small GTPase (ARL8)	0.03	OrthoFinder output from all 47 species
Mp2g10180.1	ARLA1C, ATARLA1C	small GTPase (ARL8)	0.03	OrthoFinder output from all 47 species
Nbi_g15960	ARLA1C, ATARLA1C	small GTPase *(ARL8) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0015693	magnesium ion transport	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	9	178

External Links

No external refs found!