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  5. Zm00001e038742_P001

Zm00001e038742_P001 (Zm00001e038742)


Aliases : Zm00001e038742

Description : RING-HC-class E3 ligase


Gene families : OG0006828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038742_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Dcu_g10128 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007932001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os03g31320.2 LOC_Os03g31320 RING-HC-class E3 ligase 0.06 OrthoFinder output from all 47 species
Solyc02g088570.2.1 Solyc02g088570 RING-HC-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR027370 Znf-RING_euk 46 88
No external refs found!