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  5. Zm00001e038463_P001

Zm00001e038463_P001 (Zm00001e038463)


Aliases : Zm00001e038463

Description : E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana (sp|q9sy88|csu1_arath : 386.0)


Gene families : OG0005972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038463_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Ala_g07319 No alias regulatory E3 ubiquitin ligase *(CSU1) of COP1 activity... 0.04 OrthoFinder output from all 47 species
LOC_Os03g17170.1 LOC_Os03g17170 E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g01630.1 No alias E3 ubiquitin-protein ligase CSU1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR027799 Rtf2_RING-finger 186 285
IPR031790 Znf-NOSIP 5 75
No external refs found!