1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e038437_P002

Zm00001e038437_P002 (Zm00001e038437)


Aliases : Zm00001e038437

Description : Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana (sp|q8gyl7|pp361_arath : 625.0)


Gene families : OG0012110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012110_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038437_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.08 OrthoFinder output from all 47 species
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g44072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.05 OrthoFinder output from all 47 species
LOC_Os03g17634.1 LOC_Os03g17634 Pentatricopeptide repeat-containing protein At5g02830,... 0.05 OrthoFinder output from all 47 species
Solyc09g007200.4.1 Solyc09g007200 Pentatricopeptide repeat-containing protein At5g02830,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 487 535
IPR002885 Pentatricopeptide_repeat 547 603
IPR002885 Pentatricopeptide_repeat 374 434
IPR033443 PPR_long 216 342
No external refs found!