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  5. Zm00001e038319_P001

Zm00001e038319_P001 (CP1, ATCP1, Zm00001e038319)


Aliases : CP1, ATCP1, Zm00001e038319

Description : Calcium-binding protein CP1 OS=Arabidopsis thaliana (sp|q9fdx6|cp1_arath : 87.0)


Gene families : OG0002586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038319_P001
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Ceric.24G033200.1 CEN2, Ceric.24G033200 not classified & original description: pacid=50628499... 0.04 OrthoFinder output from all 47 species
Ceric.24G033400.1 MSS3, Ceric.24G033400 not classified & original description: pacid=50628894... 0.04 OrthoFinder output from all 47 species
Dac_g25895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20281 UNE14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48933 CPK31 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13581 UNE14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g16520.1 TCH3, ATCAL4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07360 CML11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24974 UNE14 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g058720.4.1 CP1, ATCP1,... Calcium-binding protein CP1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g50847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 74 137
No external refs found!