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  5. Zm00001e038257_P006

Zm00001e038257_P006 (SPK1, Zm00001e038257)


Aliases : SPK1, Zm00001e038257

Description : DHR2-type RopGEF guanine nucleotide exchange factor


Gene families : OG0004216 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038257_P006
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AT4G16340 SPK1 guanyl-nucleotide exchange factors;GTPase binding;GTP binding 0.04 OrthoFinder output from all 47 species
Adi_g019435 SPK1 RopGEF guanine nucleotide exchange factor *(SPIKE) &... 0.02 OrthoFinder output from all 47 species
Als_g01211 SPK1 RopGEF guanine nucleotide exchange factor *(SPIKE) &... 0.02 OrthoFinder output from all 47 species
Aob_g23656 SPK1 RopGEF guanine nucleotide exchange factor *(SPIKE) &... 0.02 OrthoFinder output from all 47 species
Ceric.09G010400.1 SPK1, Ceric.09G010400 RopGEF guanine nucleotide exchange factor *(SPIKE) &... 0.05 OrthoFinder output from all 47 species
Dcu_g02063 SPK1 RopGEF guanine nucleotide exchange factor *(SPIKE) &... 0.02 OrthoFinder output from all 47 species
Ehy_g21171 SPK1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014992001 SPK1 Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
LOC_Os03g21080.1 SPK1, LOC_Os03g21080 DHR2-type RopGEF guanine nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Lfl_g05754 SPK1 RopGEF guanine nucleotide exchange factor *(SPIKE) &... 0.03 OrthoFinder output from all 47 species
MA_107789g0010 SPK1 Guanine nucleotide exchange factor SPIKE 1... 0.03 OrthoFinder output from all 47 species
Solyc08g016060.1.1 SPK1, Solyc08g016060 Guanine nucleotide exchange factor SPIKE 1... 0.06 OrthoFinder output from all 47 species
Solyc08g016070.3.1 SPK1, Solyc08g016070 Guanine nucleotide exchange factor SPIKE 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027007 C2_DOCK-type_domain 470 639
No external refs found!