Zm00001e038223_P001 (Zm00001e038223)

Aliases : Zm00001e038223

Description : DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica (sp|q0e3x4|rh35a_orysj : 1019.0)

Gene families : OG0005520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005520_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e038223_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00113470	evm_27.TU.AmTr_v1...	DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AT5G51280	No alias	DEAD-box protein abstrakt, putative	0.03	OrthoFinder output from all 47 species
Als_g26056	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os06g48210.1	LOC_Os06g48210	DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013399	No alias	not classified & original description: CDS=1-1587	0.02	OrthoFinder output from all 47 species
Sam_g09581	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g28351	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	197	376
IPR001650	Helicase_C	412	519

External Links

No external refs found!