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  5. Zm00001e038047_P004

Zm00001e038047_P004 (POK, TTD8, ATVPS52,...)


Aliases : POK, TTD8, ATVPS52, Zm00001e038047

Description : component VPS52/POK of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes


Gene families : OG0004170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004170_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038047_P004
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Adi_g114583 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.04 OrthoFinder output from all 47 species
Als_g22344 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Azfi_s0293.g063465 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Cre08.g367200 POK, TTD8, ATVPS52 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder output from all 47 species
Dcu_g01774 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Ehy_g03868 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
GSVIVT01012102001 POK, TTD8, ATVPS52 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.02 OrthoFinder output from all 47 species
LOC_Os03g30460.1 POK, TTD8,... component VPS52/POK of GARP/EARP... 0.08 OrthoFinder output from all 47 species
Lfl_g03261 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.02 OrthoFinder output from all 47 species
MA_196188g0010 POK, TTD8, ATVPS52 Vacuolar protein sorting-associated protein 52 A... 0.02 OrthoFinder output from all 47 species
Mp6g21530.1 POK, TTD8, ATVPS52 component VPS52/POK of GARP/EARP... 0.02 OrthoFinder output from all 47 species
Pir_g08942 POK, TTD8, ATVPS52 component *(VPS52/POK) of GARP/EARP... 0.03 OrthoFinder output from all 47 species
Smo235014 POK, TTD8, ATVPS52 Vesicle trafficking.target membrane tethering.GARP/EARP... 0.03 OrthoFinder output from all 47 species
Solyc02g094090.4.1 POK, TTD8,... component VPS52/POK of GARP/EARP... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007258 Vps52 81 580
No external refs found!