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  5. Zm00001e037977_P002

Zm00001e037977_P002 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1, Zm00001e037977

Description : MCP1 programmed cell death metacaspase-like regulator


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037977_P002

Target Alias Description ECC score Gene Family Method Actions
AT4G25110 AtMC2, MC2 metacaspase 2 0.03 OrthoFinder output from all 47 species
Aop_g47751 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Dac_g37827 AtMC2, MC2 programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
GSVIVT01015724001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.04 OrthoFinder output from all 47 species
LOC_Os03g27120.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
LOC_Os03g27210.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Len_g50239 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
MA_191850g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sam_g19037 No alias programmed cell death metacaspase-like regulator *(MCP1)... 0.01 OrthoFinder output from all 47 species
Solyc01g105300.4.1 AtMC3, MC3,... MCP1 programmed cell death metacaspase-like regulator 0.04 OrthoFinder output from all 47 species
Solyc01g105310.3.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Spa_g04785 ATMC1, LOL3,... programmed cell death metacaSpase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Tin_g27899 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.01 OrthoFinder output from all 47 species
Zm00001e001877_P002 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 16 40
No external refs found!