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  5. Zm00001e037919_P001

Zm00001e037919_P001 (ATHEXP BETA 1.4,...)


Aliases : ATHEXP BETA 1.4, ATEXPB2, EXPB2, Zm00001e037919

Description : Expansin-B1 OS=Zea mays (sp|p58738|expb1_maize : 482.0)


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037919_P001
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AT5G39310 EXPA24, ATEXP24,... expansin A24 0.03 OrthoFinder output from all 47 species
Als_g31390 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12461 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20874 ATEXPA4, ATEXP4,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70352 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11792 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14507 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008762001 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
GSVIVT01032681001 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01033691001 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g01610.1 ATHEXP BETA 1.4,... Expansin-B1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os03g01650.1 ATHEXP BETA 1.4,... Expansin-B1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os08g44790.1 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g40090.1 ATHEXP BETA 1.4,... Expansin-B9 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os12g36040.1 EXP9, EXPA9,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
MA_100868g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Ppi_g24739 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 80 158
IPR007117 Expansin_CBD 172 253
No external refs found!