1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e037578_P001

Zm00001e037578_P001 (ATEXPA20, ATEXP20,...)


Aliases : ATEXPA20, ATEXP20, EXPA20, EXP20, ATHEXP ALPHA 1.23, Zm00001e037578

Description : alpha-class expansin


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037578_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 OrthoFinder output from all 47 species
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G38400 ATEXPL2, EXPL2,... expansin-like A2 0.04 OrthoFinder output from all 47 species
AT5G02260 EXP9, EXPA9,... expansin A9 0.05 OrthoFinder output from all 47 species
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.02 OrthoFinder output from all 47 species
Aspi01Gene41815.t1 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0043.g027115 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=159-980 0.04 OrthoFinder output from all 47 species
Azfi_s0157.g053831 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=10-816 0.03 OrthoFinder output from all 47 species
Azfi_s0206.g057815 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=254-1036 0.02 OrthoFinder output from all 47 species
Azfi_s0578.g078256 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=388-1158 0.02 OrthoFinder output from all 47 species
Cba_g10144 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G091400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G052200.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G024200.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G039900.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G040200.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G040500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G040800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041200.1 EXP15, ATEXPA15,... not classified & original description: pacid=50618023... 0.03 OrthoFinder output from all 47 species
Ceric.17G041500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041700.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042000.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042100.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042200.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042300.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G042500.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z225900.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G024500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g00758 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05265 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23857 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25448 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g41111 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029411001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01035233001 ATEXP13,... Expansin-A13 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g16730.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g44108.1 ATHEXP BETA 1.4,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g06010.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g44780.1 EXPB3, ATEXPB3,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os06g50400.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g39640.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40700.1 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
Lfl_g27479 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28510 ATEXPL2, EXPL2,... alpha-like-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
MA_21214g0010 EXPB3, ATEXPB3,... beta-class expansin 0.06 OrthoFinder output from all 47 species
Mp3g12300.2 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Nbi_g11205 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20453 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43367 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000532 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=37-810 0.02 OrthoFinder output from all 47 species
Smo231226 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 OrthoFinder output from all 47 species
Smo409954 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Smo91129 EXP15, ATEXPA15,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 OrthoFinder output from all 47 species
Solyc02g088100.3.1 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc04g081870.4.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc06g005560.4.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc09g010860.4.1 ATEXPA3, EXP3,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc10g008440.3.1 EXPB3, ATEXPB3,... beta-class expansin 0.03 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Spa_g25448 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40847 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002337_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e008845_P003 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
Zm00001e037879_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e040578_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 172 249
IPR009009 RlpA-like_DPBB 74 161
No external refs found!